Commit bb25ec08 authored by Mikael Boden's avatar Mikael Boden

fix_webservice_GO

parent b7564425
......@@ -118,7 +118,7 @@ class GO():
if line.startswith('!'):
continue
(gene, symb, qual, term, evid, onto, taxa) = _extractAnnotFields(line, annotfile_columns)
print(gene, symb, qual, term, evid, onto, taxa)
#print(gene, symb, qual, term, evid, onto, taxa)
try:
(taxa_q, terms_map) = self.annots[gene]
terms_map[term] = (evid, qual != 'NOT')
......
......@@ -17,7 +17,7 @@ import gzip
"""
__ebiUrl__ = 'http://www.ebi.ac.uk/Tools/' # Use UQ mirror when available
__ebiGOUrl__ = 'http://www.ebi.ac.uk/QuickGO/' # Use UQ mirror when available
__ebiGOUrl__ = 'http://www.ebi.ac.uk/QuickGO-Old/' # Use UQ mirror when available
__uniprotUrl__ = 'http://www.uniprot.org/' #
def fetch(entryId, dbName='uniprotkb', format='fasta'):
......
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